QUT/Melbourne MACSYS Workshop

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QUT/Melbourne MACSYS Workshop

QUT/Melbourne MACSYS Workshop

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This is a two-day workshop at QUT’s Gardens Point Campus in Brisbane involving members of the QUT and Melbourne nodes.

Schedule

Day 1 – Thursday, 20 November

10:00 am: Introduction to workshop – Jen Flegg & Mat Simpson

10:00 am:  Session 1 Presentations – Chair: Kai Li

  • Modelling mRNA poly(A) tail dynamics – Hilary Hunt
  • Modelling wine-fermenting yeasts with ODEs: Can pairwise interactions predict the behaviour of a full community? – Alexander Johnston
  • One of the many? Structural uncertainty in reaction network inference – Elijah Foo
  • Inference for differential equation models without knowing their solutions – James Bennett
  • Inference, identifiability, and model misspecification – Alexander Browning
  • Discrete lattice-based random walk models for population dynamics – Adarshkrishnan Rajakumar

12:00 pm: Lunch

1:30 pm: Collaboration – with an emphasis on trying to work with people from different nodes

3:00 pm: Coffee break

3:30 pm: Collaboration

5:00 pm:  Day 1 concludes

Day 2 – Friday, 21 November

9:30 am: Session 2 Presentations – Chair: Alexander Johnston

  • Machine Learning-Enhanced Workflows for Whole-Cell Model Perturbation Experiments – Sophie Wharrie
  • Mathematical modeling of growing biological tissue interfaces – Shahak Kuba
  • New mathematical models of biological tissue mechanics – Yuuka Xiao Ying Foo
  • Towards unifying mechanical models in biology – Kai Li

10:30 am: Coffee Break

11:00 am: Session 3 Presentations – Chair: James Bennett

  • Bayesian Inference for GLUT4 translocation with Insulin – Chris Drovandi
  • Bayesian Parameter Balancing Enables Robust and Consistent Estimation of Kinetic Parameter Uncertainty – TrungTin Nguyen
  • Prediction-centric calibration for parameter inference of ODE models
  • Multimodal Fusion for AI Virtual Cell

12:00 pm: Lunch Break

1:30 pm:  Collaboration

3:00 pm:  Workshop concludes

  • Rooms are booked until 5 pm for any further collaboration if wanted
 

Date And Time

20-11-2025 to
21-11-2025
 

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ARC Centre of Excellence for the Mathematical Analysis of Cellular Systems (MACSYS)

  • The University of Melbourne Victoria 3010 Australia
  • +61 3 8344 9188

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